The tests, which 23andMe does not specify, are just some of the 200 or more genetic tests for common diseases, conditions and drug responses offered as part of the company's Personal Genome Service, which currently retails at US$299.
Over the next six months, the company plans to submit another 100 tests for review.
'23andMe is working proactively with the FDA to ensure the industry delivers high quality information that consumers can trust', co-founder Anne Wojcicki said in a statement on the company's website.
The application, made under the least stringent of the two types of medical device review, will assess 23andMe's processes for analysing and interpreting genetic test results.
The FDA will check that 23andMe delivers on its medical claims and that it provides the public with access to safe and effective medical devices. The process of review and obtaining clearance is expected to take several months.
Most of the tests approved by the FDA are for a single disease and give a one-off result. Not only does 23andMe test for multiple conditions, the results of genetic testing are continuously updated as more results from genome-wide association studies are published in the scientific literature.
'We are hopeful that the existing regulatory framework is flexible enough to accommodate the dynamic nature of genetic science while protecting individual access', Ashley Gould, Chief Business Officer at 23andMe told Nature.
Until now, 23andMe has avoided government regulation by arguing that it provides an informational, not a medical service.
'It's the next step for us to work with the FDA and actually say, "this is clinically relevant information and consumers should work with their physicians on what to do with it"', Wojcicki told CBC News.
'FDA clearance is an important step on the path towards getting genetic information integrated with routine medical care', she said.
23andMe's genetic testing service, along with other personal genome companies, has already attracted scrutiny from groups including the US Government Accountability Office and the European Academies Science Advisory Council for offering tests that have little clinical value.
However, several accounts are emerging where doctors have been able to use data obtained from companies, such as 23andMe, to identify patients with a higher risk of treatable health problems, such as response to the drug Clopidogrel or colon cancer.
James Evans, professor of genetics and medicine at the University of North Carolina, said much of the information reported by 23andMe is 'relatively useless' and 'in the realm of entertainment', but that in some cases the findings of direct-to-consumer tests can assist doctors to identify certain conditions.
'I think we've now entered an era where these direct-to-consumer offerings are beginning to have real medical relevance, and therefore I am in favour of them being done within some regulatory context', he said.
Dr Eric Lander, president and director of the Broad Institute of MIT and Harvard, agreed: 'Many consumers are going to want to know this information, and you don't need a hospital to obtain it, so it's important to make sure it's well regulated'.
'I think 23andMe is taking a very forward-leaning step'.
This year has seen 23andMe increase its emphasis on health and disease. Earlier this year it filed a patent for its discovery of a genetic marker in Parkinson's disease. It also recently acquired CureTogether, a website which brings patients together to describe their experiences with disease and treatments.